Izvestiya of Saratov University.

Chemistry. Biology. Ecology

ISSN 1816-9775 (Print)
ISSN 2541-8971 (Online)


Full text:
(downloads: 113)
Language: 
Russian
Heading: 
Article type: 
Article
UDC: 
577.359

Evaluation of the secondary structure of poly-?-glutamic acid produced by Bacillus subtilis EGP5QL12 by circular dichroism spectroscopy method

Autors: 
Chernykh Marina Vladimirovna, Saratov State University
Ibrahim Ibrahim M., Saratov State University
Grinev Vyacheslav Sergeevich, Institute of Biochemistry and Physiology of Plants and Microorganisms of the Russian Academy of Sciences
Sigida Elena Nikolaevna, Institute of Biochemistry and Physiology of Plants and Microorganisms of the Russian Academy of Sciences
Fedonenko Yulia P., Institute of Biochemistry and Physiology of Plants and Microorganisms of the Russian Academy of Sciences
Konnova Svetlana Anatolyevna, Saratov State University
Abstract: 

An extracellular polymer was isolated from the culture liquid of Bacillus subtilis EGP5QL12 with the yield of 5,6 g/L. On the basis of the data of thin layer chromatography, colorimetric analyses and FTIR spectroscopy, it was established that the polymer is poly-?glutamic acid (PGA). PGA is widely used in medicine, cosmetology and the food industry due to its ability to bind water and metal ions. To assess the biotechnological potential of the isolated polymer and predict the possibilities of its application in various fields of the national economy, it is necessary to analyze the characteristic spectral features that make it possible to establish its secondary structure. The isolated PGA preparation was analyzed by circular dichroism spectroscopy at various pH values. According to the results of this study, it was found that the polymer forms predominantly ?-structures with a low proportion of irregular structures and ?-helices, which gives it a high potential for creating hydrogels and composite materials.

Reference: 
  1. Liu C., Kingsley Baffoe D., Zhan Y., Zhang M., Li Y., Zhang G. Halophile, an essential platform for bioproduction. J. Microbiol. Methods, 2019, vol. 166, A. 105704.
  2. Dahiya D., Chettri R., Nigam P. S. Biosynthesis of polyglutamic acid (?-PGA), a biodegradable and economical polyamide biopolymer for industrial applications. In: Das S., Ranjan Dash H., eds. Microbial and Natural Macromolecules. London, Academic Press, 2020, pp. 681–988.
  3. Ibrahim I. M., Konnova S. A., Sigida E. N., Fedonenko Yu. P., Safronova V. I., Elbanna К. A. Exopolysaccharide-Producing Halophilic and Halotolerant Microorganisms Isolated from the Saline Lakes Qarun (Egypt) and Elton (Russia). Izvestiya of Saratov University. Chemistry. Biology. Ecology, 2018, vol. 18, iss. 3, pp. 345–353 (in Russian). https://doi.org/10.18500/1816-9775-2018-18-3-345-353
  4. Sehgal S. N., Gibbons N. E. Effect of some metal ions on the growth of Halobacterium cutirubrum. Can. J. Microbiol., 1960, vol. 6, iss. 2, pp. 165–169.
  5. Dubois M., Gilles K. A., Hamilton J. K., Rebers P. A., Smith F. Colorimetric method for determination of sugars and related substances. Anal. Chem., 1956, vol. 28, pp. 350–356.
  6. Scopes R. K. Protein Purifi cation: Principles and Practice. New York, Springer, 1982. 358 p.
  7. Wang L. L. Conformations and molecular interactions of poly-?-glutamic acid as a soluble microbial product in aqueous solutions. Sci. Rep., 2017, vol. 7, iss. 1, pp. 1–11.
  8. Nevskaya N. A., Chirgadze Y. N. Infrared spectra and resonance interactions of amide-I and II vibration of alpha-helix. Biopolymers, 1976, vol. 15, iss. 4, pp. 637–648.
  9. Ho G. H. ?-Polyglutamic acid produced by Bacillus subtilis (Natto): Structural characteristics, chemical properties and biological functionalities. J. Chin. Chem. Soc., 2006, vol. 53, iss. 6, pp. 1363–1384.
  10. Brahms S., Brahms J. Determination of protein secondary structure in solution by vacuum ultraviolet circular dichroism. J. Mol. Biol., 1980, vol. 138, no. 2, pp. 149–178.
  11. Wang L. Complexation and conformation of lead ion with poly-?-glutamic acid in soluble state. PloS One, 2019, vol. 14, iss. 9, A. e0218742.
Received: 
03.05.2021
Accepted: 
14.05.2021
Published: 
24.09.2021